BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038F12SP1|AL430584
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 1709 0.0
>3x_Contig1789
Length = 30977
Score = 1709 bits (860), Expect = 0.0
Identities = 865/868 (99%)
Strand = Plus / Minus
Query: 3 aacttgcaaactactacattagacaaccaggattctgcgaatgctgcaggtaccgccagt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12332 aacttgcaaactactacattagacaaccaggattctgcgaatgctgcaggtaccgccagt 12273
Query: 63 tcaggttcaggtgccggttcaagtgatgctgctccatccggtcaaccttcgacagctcaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12272 tcaggttcaggtgccggttcaagtgatgctgctccatccggtcaaccttcgacagctcaa 12213
Query: 123 tctcaatcgtcagctagcaggcaatactcatcgtttgaagatcaatatggtcgtttaccc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12212 tctcaatcgtcagctagcaggcaatactcatcgtttgaagatcaatatggtcgtttaccc 12153
Query: 183 ccaggatgggaaagaagaacggataactttggaagaacatattatgtggatcwtaataca 242
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12152 ccaggatgggaaagaagaacggataactttggaagaacatattatgtggatcataataca 12093
Query: 243 aggacaacaacatggaaaagacccactttggatcaatccgaggttcaacgtgtcaacacc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12092 aggacaacaacatggaaaagacccactttggatcaatccgaggttcaacgtgtcaacacc 12033
Query: 303 gaactagaacgtagacaacacagaggaagaactttacctgatggttgtgctcaatcagag 362
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 12032 gaactagaacgtagacaacacagaggaagaactttacctgatggtggtgctcaatcagag 11973
Query: 363 ggctcgtcttcatcaaacgttgctgttcataccggtactggatctcaaactcctgccgta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11972 ggctcgtcttcatcaaacgttgctgttcataccggtactggatctcaaactcctgccgta 11913
Query: 423 aacggttcagcagctgctacttttgctgccactgggggtaccacatcggggttgggtgaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11912 aacggttcagcagctgctacttttgctgccactgggggtaccacatcggggttgggtgaa 11853
Query: 483 cttccaccaggttgggaacaacggttcactcctgaaggaagagcgtacttcgttgatcac 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11852 cttccaccaggttgggaacaacggttcactcctgaaggaagagcgtacttcgttgatcac 11793
Query: 543 aacacaagaaccacgacatgggtcgatccaagaagacaacaatatattagawcctatggg 602
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 11792 aacacaagaaccacgacatgggtcgatccaagaagacaacaatatattagaacctatggg 11733
Query: 603 ccttccacaaataccatacaacaacaacctgtatctcagttaggacctttgccttctggt 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11732 ccttccacaaataccatacaacaacaacctgtatctcagttaggacctttgccttctggt 11673
Query: 663 tgggagatgagattgacaaacacagcccgtgtatacttcgttgaccataacactaagacc 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11672 tgggagatgagattgacaaacacagcccgtgtatacttcgttgaccataacactaagacc 11613
Query: 723 accacttgggatgatcctagattaccttcttccttggatcaaaacgttccacagtataag 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11612 accacttgggatgatcctagattaccttcttccttggatcaaaacgttccacagtataag 11553
Query: 783 cgtgacttcagacgtaaggttatttacttcagatcccaaccggctttaagaattctacca 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11552 cgtgacttcagacgtaaggttatttacttcagatcccaaccggctttaagaattctacca 11493
Query: 843 ggtcaatgtcacatcagagtacgcagaa 870
||||||||||||||||||||||||||||
Sbjct: 11492 ggtcaatgtcacatcagagtacgcagaa 11465
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5410
Number of Sequences: 1807
Number of extensions: 5410
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)